嗜铁钩端螺旋菌(Leptospirillum ferriphilum)gyrB基因的PCR扩增、克隆与序列分析
高健, 康健, 邱冠周. 嗜铁钩端螺旋菌(Leptospirillum ferriphilum)gyrB基因的PCR扩增、克隆与序列分析[J]. 激光生物学报, 2011, 20(3): 367.
GAO Jian, KANG Jian, QIU Guan-zhou. PCR Amplification, Cloning and Sequence Analysis of gyrB Gene with a Pair of Degenerate Primer from Leptospirillum ferriphilum[J]. Acta Laser Biology Sinica, 2011, 20(3): 367.
[1] YAMAMOTO S, HARAYAMA S. PCR Amplification and Direct Sequencing of gyrB Genes with Universal Primers and Their Application to the Detection and Taxonomic Analysis of Pseudomonas putida Strains[J]. Appl Environ Microbiol, 1995, 61(3): 1104-1109.
[2] YAMAMOTO S, BOUVET P J M, HARAYAMA S. Phylogenetic Structures of the Genus Acinetobacter Based on the gyrB Sequences: Comparison with the Grouping by DNA-DNA Hybridization[J]. Int J Syst Evol Microbiol, 1999, 49(1): 87-95.
[3] YAMAMOTO S, HARAYAMA S. Phylogenetic Relationships of Pseudomonas putida Strains Deduced from the Nucleotide Sequences of gyrB, rpoD, and 16S rRNA Genes[J]. Int J Syst Evol Microbiol, 1998, 48(3): 813-819.
[4] VENKATESWARAN K, MOSER D P, DOLLHOPF M E, et al. Polyphasic Taxonomy of the Genus Shewanella and Description of Shewanella oneidensis sp. nov[J]. Int J Syst Evol Microbiol, 1999, 49(2): 705-724.
[5] KASAI H, EZAKI T, HARAYAMA S. Differentiation of Phylogenetically Related Slowly Growing Mycobacteria by Their gyrB Sequences[J]. J Clin Microbiol, 2000, 38(1): 301-308.
[6] OCHMAN H, WILSON A C. Evolution in Bacteria: Evidence for a Universal Substitution Rate in Cellar Genomes[J]. J Mol Evol, 1987, 26: 74-86.
[7] HUANG W M. Bacterial Diversity Based on Type II DNA Topoisomerase Genes[J]. Annu Rev Genet, 1996, 30: 79-107.
[8] ASH C, FARROW J A E, WALLBANKS S, et al. Phylogenetic Heterogeneity of the Genus Bacillus Revealed by Comparative Analysis of Small Subunit-ribosomal RNA Sequences[J]. Let Appl Microbiol, 1991, 13(4): 202-206.
[9] FALCO L, POGLIANI C, CURUTCHET G, et al. A Comparison of Bioleaching of Covellite Using Pure Cultures of Acidithiobacillus ferrooxidans and Acidithiobacillus thiooxidans or a Mixed Culture of Leptospirillum ferrooxidans and Acidithiobacillus thiooxidans[J]. Hydrometallurgy, 2003, 71(1-2): 31-36.
[10] JOHNSON D B, OKIBE N, HALLBERG K B. Differentiation and Identification of Iron-oxidizing Acidophilic Bacteria Using Cultivation Techniques and Amplified Ribosomal DNA Restriction Enzyme Analysis[J]. J Microbiol Methods, 2005, 60(3): 299-313.
[11] RAWLINGS D E, TRIBUTSCH H, HANSFORD G S. Reasons why’Leptospirillum’-like Species rather than Thiobacillus Ferrooxidans are the Dominant Iron-oxidizing Bacteria in many Commercial Processes for the Biooxidation of Pyrite and Related Ores[J]. Microbiology, 1999, 145(1): 5-13.
[12] RAWLINGS D E. Restriction Enzyme Analysis of 16S rRNA Genes for the Rapid Identification of Thiobacillus ferrooxidans, Thiobacillus thiooxidans and Leptospirillus ferrooxidans Strains in Leaching Environments. In C A Jerez, T Vargas, H Toledo, and J V Wiertz (ed), Bio-hydrometallurgical Processing[C]. University of Chile Press, Santiago, Chile, 1995, 2: 9-17.
[13] CORAM N J, RAWLINGS D E. Molecular Relationship between Two Groups of Leptospirillum and the Finding that the World and the Leptospirillum ferriphilum sp. nov. Dominates South African Commercial Biooxidation Tanks that Operate at 40℃[J]. Appl Environ Microbiol, 2002, 68(2): 838-845.
[14] MARKOSYAN G E. A New Iron-oxidizing Bacterium-Leptospirillum ferrooxidans nov. gen. nov. sp[J]. Biol J Armen, 1972, 25: 26-29 (in Russian).
[15] GOLOVACHEVA R S, GOLYSHINA O V, KARAVAIKO G I, et al. A New Ironoxidizing Bacterium, Leptospirillum thermoferrooxidans sp. Nov[J]. Mikrobiologiya, 1992, 61: 744-750.
[16] TYSON G W, LO I, BAKER B J, et al. Genome-Directed Isolation of the Key Nitrogen Fixer Leptospirillum ferrodiazotrophum sp. nov. from an Acidophilic Microbial Community[J]. Appl Environ Microbiol, 2005, 71(10): 6319-6324.
[17] GILBERT E J, MAXWELL A. The 24 kDa N-terminal Subdomain of the DNA gyrase B Protein Binds Coumarin Drugs[J]. Mol Microbiol, 1994, 12 (3): 365-373.
[18] ALI J A, JACKSON A P, HOWELLS A J, et al. The 43 kDa N-terminal Fragment of the Gyrase B Protein Hydrolyses ATP and Binds Coumarin Drugs[J]. Biochemistry, 1993, 24: 2717-2724.
[19] SENGUPTA T, MUKHERJEE M, DAS A, et al. Characterization of the ATPase Activity of Topoisomerase II from Leishmania Donovani and Identification of Residues Conferring Resistance to Etoposide[J]. Biochem Journal, 2005, 390 (2): 419-426.
高健, 康健, 邱冠周. 嗜铁钩端螺旋菌(Leptospirillum ferriphilum)gyrB基因的PCR扩增、克隆与序列分析[J]. 激光生物学报, 2011, 20(3): 367. GAO Jian, KANG Jian, QIU Guan-zhou. PCR Amplification, Cloning and Sequence Analysis of gyrB Gene with a Pair of Degenerate Primer from Leptospirillum ferriphilum[J]. Acta Laser Biology Sinica, 2011, 20(3): 367.